Disentangle Things by Ivan Hanigan

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reml-and-rfigshare-part-2

In the last post I explored the functionality of reml. This time I will try to send data to figshare.

First follow These Instructions to get rfigshare set up. In particular store your figshare credentials in ~/.Rprofile

Code:reml-and-rfigshare-part-2

# func
require(devtools)
install_github("reml", "ropensci")
require(reml)
install_github("rfigshare", "ropensci")
require(rfigshare)
install_github("disentangle", "ivanhanigan")
require(disentangle)
# load
fpath <- system.file(file.path("extdata","civst_gend_sector_eml.xml"), package = "disentangle")
setwd(dirname(fpath))
obj <- eml_read(fpath)
# clean
obj
# do

## STEP 1: find one of the preset categories
# available. We can ask the API for
# a list of all the categories:
list <- fs_category_list()
list[grep("Survey", list)]

## STEP 2: PUBLISH TO FIGSHARE
id <- eml_publish(fname,
                  description="Example EML
                    A fictional dataset",
                  categories = "Survey results",
                  tags = "EML",
                  destination="figshare"
                  )
# there are several warnings
# but go to figshare and it has sent the metadata and data OK

# make public using either the figshare web interface, the
# rfigshare package (using fs_make_public(id)) or just by adding
# the argument visibility = TRUE to the above eml_publish
fs_make_public(id)